Modeling the Distribution of the Chytrid Fungus Batrachochytrium dendrobatidis with Special Reference to Ukraine.

Amphibians are the most threatened group of vertebrates. While habitat loss poses the greatest threat to amphibians, a spreading fungal disease caused by Batrachochytrium dendrobatidis Longcore, Pessier & D.K. Nichols 1999 (Bd) is seriously affecting an increasing number of species. Although Bd is widely prevalent, there are identifiable heterogeneities in the pathogen's distribution that are linked to environmental parameters. Our objective was to identify conditions that affect the geographic distribution of this pathogen using species distribution models (SDMs) with a special focus on Eastern Europe. SDMs can help identify hotspots for future outbreaks of Bd but perhaps more importantly identify locations that may be environmental refuges ("coldspots") from infection. In general, climate is considered a major factor driving amphibian disease dynamics, but temperature in particular has received increased attention. Here, 42 environmental raster layers containing data on climate, soil, and human impact were used. The mean annual temperature range (or 'continentality') was found to have the strongest constraint on the geographic distribution of this pathogen. The modeling allowed to distinguish presumable locations that may be environmental refuges from infection and set up a framework to guide future search (sampling) of chytridiomycosis in Eastern Europe.

Top-down and bottom-up effects and relationships with local environmental factors in the water frog-helminth systems in Latvia.

Semi-aquatic European water frogs (Pelophylax spp.) harbour rich helminth infra-communities, whose effects on host population size in nature are poorly known. To study top-down and bottom-up effects, we conducted calling male water frog counts and parasitological investigations of helminths in waterbodies from different regions of Latvia, supplemented by descriptions of waterbody features and surrounding land use data. We performed a series of generalized linear model and zero-inflated negative binomial regressions to determine the best predictors for frog relative population size and helminth infra-communities. The highest-ranked (by Akaike information criterion correction, AICc) model explaining the water frog population size contained only waterbody variables, followed by the model containing only land use within 500 m, while the model containing helminth predictors had the lowest rank. Regarding helminth infection responses, the relative importance of the water frog population size varied from being non-significant (abundances of larval plagiorchiids and nematodes) to having a similar weight to waterbody features (abundances of larval diplostomids). In abundances of adult plagiorchiids and nematodes the best predictor was the host specimen size. Environmental factors had both direct effects from the habitat features (e.g., waterbody characteristics on frogs and diplostomids) and indirect effects through parasite-host interactions (impacts of anthropogenic habitats on frogs and helminths). Our study suggests the presence of synergy between top-down and bottom-up effects in the water frog-helminth system that creates a mutual dependence of frog and helminth population sizes and helps to balance helminth infections at a level that does not cause over-exploitation of the host resource.

Survey for Batrachochytrium dendrobatidis and Batrachochytrium salamandrivorans in Latvian Water Frogs.

We used quantitative PCR to detect Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal) in 135 samples of Pelophylax esculentus complex water frogs from 41 Latvian populations. We detected Bd in 18 populations of water frogs. None of the samples was positive for Bsal.

Environmental, anthropogenic, and spatial factors affecting species composition and species associations in helminth communities of water frogs (Pelophylax esculentus complex) in Latvia.

We investigated factors affecting species composition and patterns of species associations in parasite communities of water frogs (Pelophylax esculentus complex), applying the distance-based redundancy analysis for component communities (assemblages harboured by host populations) and Markov random fields modelling for infracommunities (assemblages harboured by individual hosts), respectively. We asked (a) What are the relative effects of variation in environmental, land use (i.e., anthropogenic), and spatial factors on the variation in the species composition of component communities (i.e., in a locality)? and (b) What is the dominant pattern of species associations in infracommunities (in a host individual), and how do these associations vary along environmental and/or anthropogenic gradients? In component communities, the greatest portion of variation in helminth species composition was explained by the combined effects of space, anthropogenic pressure, and NDVI, with the pure effect of the spatial predictor being much stronger than the effects of the remaining predictors. In infracommunities, the probability of occurrence of some, but not all, helminth species depended on the occurrence of another species, with the numbers of negative and positive co-occurrences being equal. The strength and/or sign of associations of some species pairs were spatially stable, whereas interactions between other species pairs varied along the gradient of the amount of green vegetation, from negative to positive and vice versa. We conclude that the processes in parasite infracommunities and component communities in frogs are intertwined, with both bottom-up and top-down effects acting at different hierarchical scales.

Alaria alata mesocercariae prevalence and predilection sites in amphibians in Latvia.

Alaria alata is known as a trematode with a complex life cycle. The trematode Alaria alata infects amphibians as second intermediate hosts. In the present study, we examined 390 amphibians-European water frogs Pelophylax esculentus complex (n = 335), common frogs Rana temporaria (n = 19), moor frogs Rana arvalis (n = 3), and common toads Bufo bufo (n = 30) collected from randomly selected wetland habitats in Latvia. Out of all examined specimens, 80 were tadpoles and 310 were adult amphibians. Mesocercariae of A. alata was detected in 108 specimens from all examined amphibian species, except the common toad, reaching the overall prevalence of 27.7%. Tadpoles were found to be more frequently infected with A. alata, when compared with adults, 58.8% and 22.4%, respectively. The results showed that mesocercariae accumulate in visceral membranes, different internal organs, and muscles in the head area. This is a comprehensive study to identify A. alata mesocercariae predilection sites in amphibians.

A new method for the estimation of minimum adult frog density from a large-scale audial survey.

Audial surveys of anuran amphibians (frogs, toads and similar) are cost-effective and allow for the coverage of large areas, but they are usually regarded as unsuitable for population size estimations due to imperfect detection. Our study demonstrated a method for obtaining minimum adult population size estimates from vocalising anuran counts by using sex ratios, life history and vocalising behaviour parameters from other studies. We collected data from 2016 to 2018 for seven taxa on 65 plots (each 25 km2) representing the entirety of Latvia. Among taxa, average breeding waterbody audible detection probabilities ranged from 0.56 to 0.88 per plot, minimum adult frog density (MAFD) estimates were from 12.0 to 51.7 individuals per km2, but the estimated fraction of population covered by MAFD varied from 57 to 86%. The least accurate density estimates were in taxa with brief calling activity and quiet mating calls (Rana temporaria), and in taxa with a calling activity dependent on the numbers of males in a pond (Bufo bufo). Our study suggests that lek-breeders would be more suitable than explosive-breeding taxa for minimum population size estimates from audial data. The use of MAFD allowed for coarse minimum population size estimates for the entire country from the audial monitoring data, these ranged from 3.7 ± 0.5 thousand (Bombina bombina) to 1.64 ± 0.47 million (B.bufo) adults.

Novel luminescent dyes for confocal laser scanning microscopy used in Trematoda parasite diagnostics.

Benzanthrone derivates are now widely used in many industrial and scientific applications as dyes for polymers and textiles. In biochemical, biomedical and diagnostics investigations benzanthrone dyes are used as a lipophilic fluorescent probe since many benzanthrone derivates demonstrate bright fluorescence and they have ability to intercalate between membrane lipids. The aim of research presented here was to assess the luminescence ability of benzanthrone derivatives using microscopic visualization of biological objects. Accordingly, specimens of freshwater trematodes: Diplostomum spathaceum, Diplodiscus subclavatus and Prosotocus confusus, were stained by novel benzanthrone dyes using different fixatives. The samples were examined under a confocal laser scanning microscope. All of the dyes tested demonstrated good results for digestive and reproductive system visualization. Based on obtained results we conclude that benzanthrone dyes could be used for internal and external structure confocal laser scanning microscopic imaging of trematode specimens.